
Sandra Byju, PhD
Postdoctoral Researcher (Marinelli Lab)
Locations
- Biophysics
- MFRC
Contact Information
Publications
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How subunit rotation controls tRNA dynamics in the ribosome.
(Byju S, Whitford PC.) bioRxiv. 2025 Jan 22 PMID: 39896572 PMCID: PMC11785223 02/03/2025
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The energy landscape of the ribosome.
(Byju S, Hassan A, Whitford PC.) Biopolymers. 2024 Mar;115(2):e23570 PMID: 38051695 SCOPUS ID: 2-s2.0-85178415935 12/06/2023
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Quenched Kitaev chain: Analogous model of gravitational collapse
(Byju S, Lochan K, Shankaranarayanan S.) Physical Review D. 15 May 2023;107(10) SCOPUS ID: 2-s2.0-85161155269 05/15/2023
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Ratchet, swivel, tilt and roll: a complete description of subunit rotation in the ribosome.
(Hassan A, Byju S, Freitas FC, Roc C, Pender N, Nguyen K, Kimbrough EM, Mattingly JM, Gonzalez RL Jr, de Oliveira RJ, Dunham CM, Whitford PC.) Nucleic Acids Res. 2023 Jan 25;51(2):919-934 PMID: 36583339 PMCID: PMC9881166 SCOPUS ID: 2-s2.0-85147047436 12/31/2022
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Quantifying biomolecular diffusion with a spherical cow model
(Freitas FC, Byju S, Hassan A, Oliveira RJD, Whitford PC.) American Journal of Physics. 1 March 2022;90(3):225-238 SCOPUS ID: 2-s2.0-85126477769 03/01/2022
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SMOG 2 and OpenSMOG: Extending the limits of structure-based models.
(de Oliveira AB Jr, Contessoto VG, Hassan A, Byju S, Wang A, Wang Y, Dodero-Rojas E, Mohanty U, Noel JK, Onuchic JN, Whitford PC.) Protein Sci. 2022 Jan;31(1):158-172 PMID: 34655449 PMCID: PMC8740843 SCOPUS ID: 2-s2.0-85118386235 10/17/2021
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The energetics of subunit rotation in the ribosome.
(Hassan A, Byju S, Whitford PC.) Biophys Rev. 2021 Dec;13(6):1029-1037 PMID: 35059025 PMCID: PMC8724491 01/22/2022